STRINGSTRING
CC1G_05412 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_05412" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_05412Uncharacterized protein (1149 aa)    
Predicted Functional Partners:
CC1G_11940
Uncharacterized protein (334 aa)
     
 
  0.983
CC1G_12433
Chromosome structural maintenance protein smc5 (1214 aa)
     
 
0.976
CC1G_15063
Structural maintenance of chromosomes protein (1182 aa)
     
   
  0.971
CC1G_03460
Uncharacterized protein (223 aa)
     
 
  0.964
CC1G_01911
Smc5-6 complex non-SMC subunit Nse4 (267 aa)
     
 
  0.963
CC1G_11918
Uncharacterized protein (1706 aa)
     
 
  0.924
CC1G_10710
Structural maintenance of chromosomes protein; Cohesin complex subunit psm1 (1243 aa)
     
   
  0.890
CC1G_06918
Cohesin subunit (1364 aa)
     
 
  0.885
CC1G_05280
Cohesin-associated protein Pds5 (1254 aa)
     
 
  0.879
CC1G_02333
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (929 aa)
   
 
  0.860
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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