STRINGSTRING
CC1G_08000 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08000" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08000Uncharacterized protein (1052 aa)    
Predicted Functional Partners:
CC1G_00587
Uncharacterized protein (988 aa)
     
 
  0.936
CC1G_01173
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (214 aa)
     
 
  0.923
CC1G_00926
Importin beta-4 subunit (1056 aa)
     
 
  0.915
CC1G_09106
Karyopherin Kap95 (864 aa)
     
 
  0.875
CC1G_04693
transportin-PC (915 aa)
     
 
  0.870
CC1G_09925
MTR4 (1059 aa)
 
 
   
  0.849
CC1G_00419
Ran binding protein 11 (1048 aa)
     
 
  0.833
CC1G_09591
Uncharacterized protein (462 aa)
     
 
  0.827
CC1G_09590
RAN binding protein-like protein (637 aa)
     
 
  0.827
CC1G_01550
Uncharacterized protein (1035 aa)
     
   
  0.816
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (9%) [HD]