STRINGSTRING
CC1G_08003 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08003" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08003Uncharacterized protein (313 aa)    
Predicted Functional Partners:
CC1G_00482
Uncharacterized protein (187 aa)
           
  0.736
CC1G_04184
Ubiquitin fusion degradation protein I (467 aa)
           
  0.682
CC1G_02809
tRNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family (564 aa)
           
  0.641
CC1G_12660
Hyphal tip 1 (252 aa)
           
  0.631
CC1G_02808
Gamma-glutamylcyclotransferase; Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides (223 aa)
           
  0.561
CC1G_09692
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (107 aa)
 
            0.507
CC1G_08730
Citrate transporter; Belongs to the mitochondrial carrier (TC 2.A.29) family (286 aa)
           
  0.487
CC1G_06303
Onanonoxo-7-onima-8-eninoihtemlysoneda (794 aa)
 
            0.482
CC1G_02805
Uncharacterized protein (705 aa)
           
  0.472
CC1G_06832
Coatomer zeta subunit (186 aa)
           
  0.422
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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