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CC1G_08006 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08006" - Zinc finger protein RTS2 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08006Zinc finger protein RTS2 (309 aa)    
Predicted Functional Partners:
CC1G_03289
Mni1p (386 aa)
           
  0.795
CC1G_04463
ATP-dependent DNA helicase (675 aa)
     
      0.712
CC1G_15293
Eukaryotic translation initiation factor SUI1 family protein (616 aa)
     
      0.709
CC1G_01767
Splicing factor 3a (220 aa)
           
  0.687
CC1G_00543
Uncharacterized protein (359 aa)
       
 
  0.609
EFM6
Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha (267 aa)
           
  0.598
CC1G_01176
Vacuolar ATP synthase subunit D (273 aa)
 
            0.575
CC1G_04534
UTP-glucose-1-phosphate uridylyltransferase (504 aa)
 
 
        0.519
CC1G_01839
Uncharacterized protein (810 aa)
           
  0.457
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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