STRINGSTRING
CC1G_08016 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08016" - Histone deacetylase in Coprinopsis cinerea
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08016Histone deacetylase (585 aa)    
Predicted Functional Partners:
CC1G_13998
Histone deacetylase-3; Belongs to the histone deacetylase family. HD Type 1 subfamily (504 aa)
     
 
  0.909
CC1G_10654
Histone deacetylase RPD3 (557 aa)
     
 
  0.769
CC1G_04427
Histone deacetylase Hda1 (590 aa)
     
 
  0.769
CC1G_05221
DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR) (962 aa)
   
      0.719
CC1G_01418
Uncharacterized protein; Belongs to the 14-3-3 family (257 aa)
       
      0.706
CC1G_00275
SGF14A; Belongs to the 14-3-3 family (203 aa)
       
      0.706
CC1G_05758
Histone deacetylase (525 aa)
       
 
  0.705
CC1G_15535
Setd1a protein (1614 aa)
   
 
  0.705
CC1G_10110
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
     
      0.697
CC1G_11833
Ubiquitin (305 aa)
       
 
  0.697
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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