STRINGSTRING
CC1G_08054 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08054" - Transforming growth factor beta regulator 1 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08054Transforming growth factor beta regulator 1 (808 aa)    
Predicted Functional Partners:
CC1G_08195
Uncharacterized protein (549 aa)
     
 
  0.805
CC1G_03894
Set1 complex component ash2 (920 aa)
     
 
  0.769
CC1G_11918
Uncharacterized protein (1706 aa)
     
 
  0.749
CC1G_15535
Setd1a protein (1614 aa)
     
   
  0.731
CC1G_01421
RUM1 (1994 aa)
     
 
  0.698
CC1G_08736
Histone H2A (149 aa)
       
 
  0.694
CC1G_06739
Uncharacterized protein (1465 aa)
     
 
  0.663
CC1G_06637
Uncharacterized protein (1042 aa)
     
 
  0.641
CC1G_00331
atypical/PIKK/TRRAP protein kinase; Belongs to the PI3/PI4-kinase family (3166 aa)
     
 
  0.608
CC1G_06443
Uncharacterized protein (398 aa)
     
 
  0.603
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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