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CC1G_03420 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03420" - Beta-hexosaminidase in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03420Beta-hexosaminidase (544 aa)    
Predicted Functional Partners:
CC1G_03425
Beta-hexosaminidase (609 aa)
   
   
 
0.804
CC1G_04870
Chitinase; Belongs to the glycosyl hydrolase 18 family (497 aa)
 
 
  0.771
CC1G_09921
Class V chitinase ChiB1; Belongs to the glycosyl hydrolase 18 family (457 aa)
 
 
  0.764
CC1G_01315
Endochitinase; Belongs to the glycosyl hydrolase 18 family (425 aa)
   
 
  0.702
CC1G_03252
Endochitinase; Belongs to the glycosyl hydrolase 18 family (464 aa)
   
 
  0.702
CC1G_04407
Class III chitinase; Belongs to the glycosyl hydrolase 18 family (511 aa)
         
  0.695
CC1G_05291
Endochitinase; Belongs to the glycosyl hydrolase 18 family (465 aa)
   
 
  0.695
CC1G_05285
Endochitinase; Belongs to the glycosyl hydrolase 18 family (477 aa)
   
 
  0.695
CC1G_00406
Chitinase; Belongs to the glycosyl hydrolase 18 family (579 aa)
   
 
  0.695
CC1G_01586
Uncharacterized protein (617 aa)
   
 
  0.695
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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