STRINGSTRING
CC1G_03428 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03428" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03428Uncharacterized protein (1252 aa)    
Predicted Functional Partners:
CC1G_01741
WD repeat-containing protein (1316 aa)
     
 
  0.698
CC1G_09186
RNA polymerase II accessory factor (422 aa)
     
 
  0.583
CC1G_03268
Pol II transcription elongation factor (1053 aa)
     
 
  0.573
CC1G_00968
RNA polymerase-associated protein LEO1 (611 aa)
       
 
  0.567
CC1G_13734
Translation repressor (1248 aa)
     
 
  0.559
CC1G_14222
Superkiller protein 3 SKI3 (1405 aa)
       
 
  0.528
CC1G_09031
Mitochondrial fission 1 protein; Has a role in mitochondrial fission (163 aa)
       
 
  0.516
CC1G_03320
Spo11 (353 aa)
       
 
  0.497
CC1G_12650
Uncharacterized protein (371 aa)
           
  0.476
CC1G_01180
williams-Beuren syndrome critical region protein 22 (285 aa)
       
 
  0.457
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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