STRINGSTRING
CC1G_10921 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_10921" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_10921Uncharacterized protein (962 aa)    
Predicted Functional Partners:
CC1G_06062
Uncharacterized protein (646 aa)
     
 
  0.855
CC1G_03313
Transcription coactivator (653 aa)
     
 
  0.846
CC1G_00331
atypical/PIKK/TRRAP protein kinase; Belongs to the PI3/PI4-kinase family (3166 aa)
     
 
  0.844
CC1G_15007
Uncharacterized protein (282 aa)
     
 
  0.843
CC1G_08318
Uncharacterized protein (1014 aa)
       
 
  0.839
CC1G_08139
Spt3 (353 aa)
       
 
  0.838
CC1G_15044
Transcription initiation factor TFIID complex 60 kDa subunit (485 aa)
     
 
  0.837
CC1G_08997
Uncharacterized protein (362 aa)
     
 
  0.836
CC1G_12056
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] (180 aa)
       
 
  0.804
CC1G_04207
Uncharacterized protein (825 aa)
       
 
  0.727
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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