Groups of genes that are frequently observed in each other's genomic neighborhood.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
beta-NAP protein (937 aa)
Predicted Functional Partners:
Uncharacterized protein (2084 aa)
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane (890 aa)
Mu-adaptin 3; Belongs to the adaptor complexes medium subunit family (471 aa)
orange-PA (236 aa)
Gamma-adaptin (846 aa)
Clathrin assembly protein AP47; Belongs to the adaptor complexes medium subunit family (436 aa)
ADP-ribosylation factor Arf1; Belongs to the small GTPase superfamily. Arf family (181 aa)
Uncharacterized protein (840 aa)
ADP-ribosylation factor (403 aa)
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family (404 aa)
Your Current Organism:
NCBI taxonomy Id: 5346 Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus