STRINGSTRING
CC1G_06293 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06293" - Flap structure-specific endonuclease in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06293Flap structure-specific endonuclease (1200 aa)    
Predicted Functional Partners:
CC1G_04251
Transcription factor TFIIH complex subunit Rad15 (789 aa)
     
 
  0.985
CC1G_06434
DNA helicase (848 aa)
     
 
  0.976
CC1G_03201
Uncharacterized protein (578 aa)
     
 
  0.969
CC1G_04546
DNA excision repair protein ERCC-1 (356 aa)
     
 
  0.961
CC1G_11203
Uncharacterized protein (1028 aa)
     
 
  0.959
CC1G_05221
DNA mismatch repair protein MSH2; Component of the post-replicative DNA mismatch repair system (MMR) (962 aa)
   
 
  0.928
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
   
 
  0.909
CC1G_02791
Uncharacterized protein (986 aa)
     
 
  0.900
CC1G_13604
Hydrophilic protein (312 aa)
     
 
  0.884
CC1G_13076
DNA repair protein rhp42 (1180 aa)
     
 
  0.870
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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