STRINGSTRING
CC1G_06364 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06364" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06364Uncharacterized protein (1495 aa)    
Predicted Functional Partners:
CC1G_02060
Uncharacterized protein (1076 aa)
     
 
  0.851
CC1G_07887
CMGC/CDK/CDK8 protein kinase (449 aa)
       
 
  0.778
CC1G_02046
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (147 aa)
       
 
  0.763
CC1G_02535
Transcription initiation factor TFIIE alpha subunit (518 aa)
       
 
  0.687
CC1G_04391
Uncharacterized protein (426 aa)
       
 
  0.538
CC1G_14204
Uncharacterized protein (332 aa)
       
 
  0.537
CC1G_14203
Uncharacterized protein (1153 aa)
       
 
  0.537
CC1G_06655
G1/S-specific cyclin-C (364 aa)
       
 
  0.525
CC1G_11509
Transcription initiation factor TFIID-1 (308 aa)
     
 
  0.501
CC1G_00467
Uncharacterized protein (150 aa)
       
 
  0.496
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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