STRINGSTRING
CC1G_06376 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06376" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06376Uncharacterized protein (863 aa)    
Predicted Functional Partners:
CC1G_02333
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (929 aa)
     
 
  0.959
CC1G_08618
DEAH family protein (1197 aa)
     
 
  0.940
CC1G_01113
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single-stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism (604 aa)
     
 
  0.909
CC1G_02791
Uncharacterized protein (986 aa)
       
 
  0.907
CC1G_11474
DNA replication helicase dna2 (1482 aa)
     
 
  0.854
CC1G_02550
Exodeoxyribonuclease 1 (895 aa)
     
 
  0.828
CC1G_13904
Uncharacterized protein (265 aa)
     
 
  0.802
CC1G_12433
Chromosome structural maintenance protein smc5 (1214 aa)
     
 
  0.801
CC1G_03320
Spo11 (353 aa)
     
   
  0.779
CC1G_05322
DNA binding protein (778 aa)
     
   
  0.726
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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