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CC1G_06433 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06433" - Splicing factor SF1 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06433Splicing factor SF1 (495 aa)    
Predicted Functional Partners:
CC1G_11763
CDC5 (822 aa)
     
 
  0.998
CC1G_09032
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (550 aa)
     
 
  0.990
CC1G_08998
pre-mRNA-processing protein prp40 (800 aa)
     
 
  0.941
CC1G_00913
Small nuclear ribonucleoprotein (1150 aa)
     
 
  0.889
CC1G_10286
pre-mRNA splicing factor (597 aa)
     
 
  0.888
CC1G_12379
U1 snRNP 70K protein (380 aa)
     
 
  0.841
CC1G_04561
Splicing factor U2AF 26 kDa subunit (230 aa)
     
 
  0.817
CC1G_11166
pre-mRNA-splicing factor CWC26 (322 aa)
       
 
  0.801
CC1G_10508
Small nuclear ribonucleoprotein polypeptide A (245 aa)
     
 
  0.791
CC1G_01767
Splicing factor 3a (220 aa)
     
 
  0.781
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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