STRINGSTRING
CC1G_06439 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06439" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06439Uncharacterized protein (170 aa)    
Predicted Functional Partners:
CC1G_13221
Uncharacterized protein (417 aa)
       
 
  0.953
CC1G_08002
Actin-like protein ARP6; Belongs to the actin family (404 aa)
     
 
  0.931
CC1G_04465
Helicase SWR1 (1624 aa)
       
 
  0.929
CC1G_00695
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (462 aa)
     
 
  0.903
CC1G_06666
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes (471 aa)
     
 
  0.857
CC1G_08736
Histone H2A (149 aa)
     
 
  0.852
CC1G_01378
SWR1-complex protein 4 (505 aa)
     
 
  0.828
CC1G_05292
SWR1-complex protein 5; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Involved in chromosome stability (268 aa)
       
 
  0.780
CC1G_08127
YEATS family protein (255 aa)
     
 
  0.775
CC1G_00052
Uncharacterized protein (587 aa)
           
  0.774
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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