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CC1G_07577 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_07577" - ATP-dependent RNA helicase DBP5 in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_07577ATP-dependent RNA helicase DBP5; Belongs to the DEAD box helicase family (466 aa)    
Predicted Functional Partners:
CC1G_06527
Uncharacterized protein (765 aa)
     
 
  0.985
CC1G_06299
Uncharacterized protein (2074 aa)
     
 
  0.950
CC1G_10065
Uncharacterized protein (618 aa)
       
 
  0.946
CC1G_03919
Crm1-F1 (1077 aa)
     
 
  0.845
CC1G_11763
CDC5 (822 aa)
     
 
  0.736
CC1G_07830
pre-mRNA-splicing factor CWC2 (384 aa)
     
 
  0.728
CC1G_12098
Polyadenylated RNA binding protein (574 aa)
     
 
  0.718
CC1G_07727
RNA annealing factor (229 aa)
     
 
  0.713
CC1G_07955
Nuclear pore complex protein (825 aa)
     
 
  0.698
CC1G_11512
Nuclear transport factor 2 (124 aa)
     
   
  0.675
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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