STRINGSTRING
CC1G_10051 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_10051" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_10051Uncharacterized protein (305 aa)    
Predicted Functional Partners:
CC1G_07993
Cleavage and polyadenylation specific factor 5 (204 aa)
     
 
  0.951
CC1G_11763
CDC5 (822 aa)
     
      0.734
CC1G_10271
mRNA transport regulator (933 aa)
           
  0.675
CC1G_14647
Uncharacterized protein (618 aa)
     
 
  0.642
CC1G_08123
Polymerase (595 aa)
     
 
  0.635
CC1G_07955
Nuclear pore complex protein (825 aa)
     
 
  0.609
CC1G_11088
mRNA 3’-end-processing protein RNA14 (857 aa)
     
   
  0.592
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3’-end formation (483 aa)
       
 
  0.578
CC1G_00405
GTPase inhibitor (235 aa)
       
      0.556
CC1G_03293
mRNA 3’-end-processing protein YSH1 (846 aa)
     
   
  0.530
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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