STRINGSTRING
CC1G_10062 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_10062" - Cytidylyltransferase in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_10062Cytidylyltransferase (646 aa)    
Predicted Functional Partners:
CC1G_08216
Exosome complex exonuclease rrp4 (314 aa)
   
 
  0.995
CC1G_05976
Exosome component Rrp46 (238 aa)
   
 
  0.995
CC1G_13591
Uncharacterized protein (189 aa)
     
 
  0.993
CC1G_14989
Exosome complex exonuclease RRP40 (233 aa)
   
 
  0.990
CC1G_06805
Exoribonuclease (206 aa)
     
 
  0.989
CC1G_12434
Uncharacterized protein (237 aa)
     
 
  0.986
CC1G_03561
Exosome component 4 (263 aa)
   
 
  0.985
CC1G_09925
MTR4 (1059 aa)
     
 
  0.976
CC1G_04187
mRNA transport regulator 3 (259 aa)
   
 
  0.975
CC1G_06615
Uncharacterized protein (199 aa)
     
 
  0.951
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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