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CC1G_06193 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06193" - II DNA helicase in Coprinopsis cinerea
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06193II DNA helicase (784 aa)    
Predicted Functional Partners:
CC1G_02550
Exodeoxyribonuclease 1 (895 aa)
   
 
  0.536
CC1G_02333
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (929 aa)
     
 
  0.533
CC1G_01113
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single-stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism (604 aa)
     
 
  0.521
CC1G_05322
DNA binding protein (778 aa)
     
 
  0.521
CC1G_08618
DEAH family protein (1197 aa)
     
 
  0.512
CC1G_02791
Uncharacterized protein (986 aa)
     
 
  0.507
CC1G_06376
Uncharacterized protein (863 aa)
     
 
  0.503
CC1G_08126
atypical/PIKK/ATR protein kinase (2345 aa)
     
 
  0.503
CC1G_14395
ATP-dependent DNA helicase pcra (966 aa)
   
 
  0.490
CC1G_07657
DNA mismatch repair protein msh6 (1269 aa)
     
 
  0.483
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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