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CC1G_06213 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06213" - ATP-dependent RNA helicase Prp43 in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06213ATP-dependent RNA helicase Prp43 (704 aa)    
Predicted Functional Partners:
CC1G_00917
Sip1/TFIP11 interacting protein (1032 aa)
     
 
  0.898
CC1G_03629
Centromere/microtubule binding protein cbf5 (522 aa)
     
 
  0.898
CC1G_13743
U5 small nuclear ribonucleoprotein component (986 aa)
     
 
  0.894
CC1G_10289
Nuclear matrix protein NMP200 (506 aa)
     
 
  0.889
CC1G_00257
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family (599 aa)
     
 
  0.868
CC1G_14189
Uncharacterized protein (397 aa)
     
 
  0.868
CC1G_06722
ATP-dependent RNA helicase drs1; Belongs to the DEAD box helicase family (754 aa)
     
 
  0.867
CC1G_10286
pre-mRNA splicing factor (597 aa)
     
 
  0.862
CC1G_11396
Nucleolar protein NOP58 (569 aa)
     
 
  0.860
CC1G_09925
MTR4 (1059 aa)
     
 
  0.856
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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