STRINGSTRING
CC1G_08065 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08065" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08065Uncharacterized protein (329 aa)    
Predicted Functional Partners:
CC1G_07802
Uncharacterized protein (353 aa)
     
  0.992
CC1G_02293
Uncharacterized protein (223 aa)
     
  0.992
CC1G_03445
Ribonuclease P/MRP protein subunit (785 aa)
     
  0.987
CC1G_08087
Uncharacterized protein (220 aa)
     
 
  0.964
CC1G_00826
Uncharacterized protein (347 aa)
         
    0.800
CC1G_01852
Uncharacterized protein (302 aa)
         
    0.800
CC1G_01038
SnRNP subunit; Small nucleolar ribonucleoprotein SNU13 (126 aa)
     
 
  0.797
CC1G_03660
Tubulin-tyrosine ligase (436 aa)
     
        0.624
CC1G_06724
Cytoplasm protein (320 aa)
     
        0.567
EFG1
rRNA-processing protein EFG1; Involved in rRNA processing (265 aa)
     
        0.566
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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