STRINGSTRING
CC1G_04105 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04105" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04105Uncharacterized protein (121 aa)    
Predicted Functional Partners:
CC1G_13743
U5 small nuclear ribonucleoprotein component (986 aa)
     
 
  0.957
CC1G_00913
Small nuclear ribonucleoprotein (1150 aa)
     
 
  0.933
CC1G_09246
pre-mRNA splicing factor (529 aa)
     
 
  0.932
CC1G_09245
DNA polymerase theta/eta (1636 aa)
     
 
  0.932
CC1G_05341
pre-mRNA splicing factor prp1 (1051 aa)
     
 
  0.919
CC1G_05238
Small nuclear ribonucleoprotein hPrp3 (633 aa)
     
 
  0.900
CC1G_01269
U4/U6 small nuclear ribonucleoprotein Prp31 (555 aa)
     
 
  0.899
CC1G_00847
U4/U6 snRNP-specific spliceosomal protein (515 aa)
     
 
  0.896
CC1G_12010
pre-mRNA splicing factor (1312 aa)
     
 
  0.893
CC1G_02328
pre-mRNA-splicing factor RSE1 (1213 aa)
     
 
  0.890
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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