STRINGSTRING
CC1G_00017 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00017" - Protein transporter SEC22 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00017Protein transporter SEC22; Belongs to the synaptobrevin family (218 aa)    
Predicted Functional Partners:
CC1G_00222
Uncharacterized protein (384 aa)
     
  0.991
CC1G_11830
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex (251 aa)
     
 
  0.969
CC1G_00507
SLY1 protein; Belongs to the STXBP/unc-18/SEC1 family (701 aa)
     
 
  0.967
CC1G_01785
Integral membrane protein sed5 (337 aa)
     
 
  0.966
CC1G_02462
Protein transporter SEC23 (764 aa)
     
 
  0.964
CC1G_13714
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (222 aa)
     
 
  0.963
CC1G_03557
Uncharacterized protein (369 aa)
     
  0.962
CC1G_03572
Protein transporter SEC24 (952 aa)
     
 
  0.951
CC1G_06731
Protein transporter SEC9 (352 aa)
     
 
  0.949
CC1G_02428
Uncharacterized protein (249 aa)
     
 
  0.943
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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