STRINGSTRING
CC1G_00057 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_00057" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_00057Uncharacterized protein (429 aa)    
Predicted Functional Partners:
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily (882 aa)
     
      0.695
CC1G_12320
Uncharacterized protein (464 aa)
     
   
  0.688
CC1G_09940
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (392 aa)
     
        0.674
CC1G_08122
Nucleolar protein 14 (942 aa)
     
        0.674
CC1G_07169
Uncharacterized protein (449 aa)
     
   
  0.658
CC1G_02297
Uncharacterized protein (390 aa)
     
      0.655
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome (611 aa)
     
        0.642
CC1G_14404
Transducin family protein/WD-40 repeat family protein (574 aa)
     
   
  0.631
CC1G_14965
Uncharacterized protein (422 aa)
     
        0.629
CC1G_06878
Uncharacterized protein (259 aa)
     
        0.625
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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