STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_000451Ammonium transporter. (477 aa)    
Predicted Functional Partners:
LENED_000909
Cyclin-dependent protein kinase inhibitor.
   
 
 0.485
LENED_003629
Delta 5 fatty acid desaturase.
   
  
 0.483
LENED_010616
Acetylglutamate kinase ARG6; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.480
LENED_009124
Glutamine synthetase; Belongs to the glutamine synthetase family.
  
  
 0.472
LENED_003950
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
   
 
  0.464
LENED_011477
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.462
LENED_000462
Urea carboxylase.
  
  
 0.446
LENED_000461
Urea carboxylase.
  
  
 0.446
LENED_001376
Phytochrome-like protein.
 
  
 
 0.443
LENED_002489
Homoaconitase.
  
  
 0.434
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.