STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFM6Protein-lysine N-methyltransferase EFM6; S-adenosyl-L-methionine-dependent protein-lysine N- methyltransferase that methylates elongation factor 1-alpha. Belongs to the class I-like SAM-binding methyltransferase superfamily. METTL21 family. EFM6 subfamily. (263 aa)    
Predicted Functional Partners:
LENED_006168
AAA family ATPase.
    
 0.928
LENED_009161
Valosin-containing protein; Belongs to the AAA ATPase family.
    
 0.928
LENED_000015
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.709
LENED_004804
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.709
LENED_011775
Heat shock protein 70.
    
  0.638
LENED_000152
Ribosome biogenesis ATPase RIX7.
   
  0.626
LENED_000151
Ribosome biogenesis ATPase RIX7.
   
  0.626
LENED_002576
Vesicular-fusion protein sec18.
    
  0.605
LENED_003494
Thyroid receptor-interacting protein 13; Belongs to the AAA ATPase family.
    
  0.605
LENED_003599
AAA-domain-containing protein.
    
  0.605
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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