STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_001699Cytochrome b5; Belongs to the cytochrome b5 family. (150 aa)    
Predicted Functional Partners:
LENED_003629
Delta 5 fatty acid desaturase.
   
 0.966
LENED_005682
Uncharacterized protein.
    
 0.962
LENED_004388
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.920
LENED_000362
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
  
 
 0.889
LENED_004542
Orotate phosphoribosyltransferase.
  
 
 0.889
LENED_011594
Cytochrome b2; Belongs to the cytochrome b5 family.
   
 0.882
LENED_008231
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates; Belongs to the fatty acid desaturase type 1 family.
   
 0.872
Le-FAD1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
   
 0.872
LENED_010920
Molybdopterin binding oxidoreductase.
   
 
 0.849
LENED_011973
Sulfite oxidase.
   
 
 0.849
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.