STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_002604Sin component scaffold protein cdc11. (1704 aa)    
Predicted Functional Partners:
LENED_005338
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.951
LENED_006708
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.951
LENED_011893
Metallo-dependent phosphatase.
   
 0.951
LENED_012522
Protein phosphatase inhibitor containing protein.
    
 
 0.943
LENED_003816
TBC-domain-containing protein.
    
 
 0.867
LENED_000664
Er-derived vesicles protein erv14.
    
 
 0.860
LENED_011540
Small nuclear ribonucleoprotein Sm D2.
    
 0.860
LENED_007642
Dynein intermediate chain.
    
 0.856
LENED_007022
Small nuclear ribonucleoprotein Sm D3.
    
 0.851
LENED_011323
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.850
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.