STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_002635Anaphase-promoting complex subunit 2; Belongs to the cullin family. (1790 aa)    
Predicted Functional Partners:
LENED_001841
Cell division control protein 16.
    
 0.997
LENED_004026
20s cyclosome subunit ( nuc2 cdc27).
    
 0.997
LENED_008158
Anaphase-promoting complex subunit apc11.
    
 0.997
LENED_011641
Anaphase promoting complex subunit 1.
    
 0.997
LENED_011962
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.997
LENED_011489
TPR-like protein.
    
 0.995
LENED_005422
ATP-dependent RNA helicase DRS1.
   
 0.994
LENED_000728
WD40 repeat-like protein.
   
 0.986
LENED_005043
Wd repeat-containing protein slp1.
   
 0.985
LENED_008725
Ubiquitin conjugating enzyme e2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.983
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.