STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_003107L-aminoadipate-semialdehyde dehydrogenase. (1043 aa)    
Predicted Functional Partners:
LENED_010029
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.908
LENED_011802
Tryptophan synthase.
  
 
 0.861
LENED_009116
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
   
  
 0.858
LENED_003480
Ebony activating protein.
  
 0.702
LENED_008222
Uncharacterized protein.
  
 0.702
LENED_002814
Polyketide synthase.
   
 0.690
LENED_005266
Polyketide synthase.
   
 0.690
LENED_007366
Polyketide synthase.
   
 0.690
LENED_003642
Protein.
   
 0.665
LENED_005267
Polyketide synthase.
   
 0.665
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.