STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_003950CDP-diacylglycerol--inositol 3-phosphatidyltransferase. (260 aa)    
Predicted Functional Partners:
LENED_007050
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
   
 0.959
LENED_003305
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
  
 
 0.948
LENED_004986
Inositol-1-monophosphatase.
  
 
 0.947
LENED_010667
Atypical PIKK PI4K protein kinase; Belongs to the PI3/PI4-kinase family.
     
 0.939
LENED_012580
Kinase-like protein; Belongs to the PI3/PI4-kinase family.
     
 0.939
LENED_005132
Inositol phosphatidylinositol phosphatase.
     
 0.928
LENED_009365
Phosphatases II.
  
 0.925
LENED_003143
Phosphatidylinositol 4-kinase type ii subunit alpha.
     
 0.911
LENED_002711
Phosphatidyl synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.910
LENED_004590
Glycosyltransferase family 4 protein.
    
 0.910
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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