STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_006192Sec8 exocyst complex component specific domain-containing protein. (1000 aa)    
Predicted Functional Partners:
LENED_001169
Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
   
 0.991
LENED_006207
Exocyst protein.
  
 0.989
LENED_000447
Exocyst complex component protein.
  
 
 0.987
LENED_002157
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
   
 0.987
LENED_001228
Exocyst complex component sec6.
   
 0.985
LENED_012003
Nuclear mrna splicing protein.
    
 0.985
LENED_006756
F-box protein pof6.
    
 0.926
LENED_006757
F-box protein pof6.
    
 0.926
LENED_012761
Rab-type small GTP-binding protein.
    
 0.908
Rab7
Rab small monomeric gtpase.
    
 0.851
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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