STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_007540Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1307 aa)    
Predicted Functional Partners:
LENED_006881
Calcium activated cation channel.
 
    
 0.875
LENED_003597
Transcription regulator; Belongs to the CDC50/LEM3 family.
    
 0.818
LENED_004754
Snare protein YKT6; Belongs to the synaptobrevin family.
 
  
 
 0.710
LENED_002611
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 0.665
LENED_000743
Calcium-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.595
LENED_010516
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
  
 
0.580
LENED_003018
Copper P-type atpase.
   
 0.568
LENED_005954
Copper-translocating P-type ATPase.
   
 0.568
LENED_007154
Heavy metal translocatin.
   
 0.568
LENED_003585
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 
 0.562
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.