STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_00799940s ribosomal protein s16. (140 aa)    
Predicted Functional Partners:
LENED_001749
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.996
LENED_003322
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.996
LENED_003385
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
  
 0.996
LENED_003344
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 0.996
LENED_003795
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.996
LENED_005339
40s ribosomal protein s11; Belongs to the universal ribosomal protein uS17 family.
  
 0.996
LENED_005407
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.996
LENED_005435
40s ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
  
 0.996
LENED_005990
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.996
LENED_005999
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 0.996
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.