STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_0110285-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (205 aa)    
Predicted Functional Partners:
LENED_012590
C-1-tetrahydrofolate synthase.
   
 0.927
LENED_002575
NAD-binding protein.
    
 0.921
LENED_004446
Phosphoribosylglycinamide formyltransferase.
    
 0.900
LENED_001126
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.825
LENED_005194
Methionyl-trna formyltransferase.
   
 
 0.770
LENED_009010
Aminoimidazole ribonucleotide synthetase.
    
 0.673
LENED_010205
Bifunctional purine biosynthesis protein ade17.
    
 0.646
LENED_011184
Uncharacterized protein.
    
 0.645
LENED_009406
Nadh-ubiquinone oxidoreductase subunit.
    
  0.642
LENED_003492
Rhomboid-domain-containing protein.
  
    0.538
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.