STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LENED_011880Translation machinery-associated protein 46. (335 aa)    
Predicted Functional Partners:
LENED_009695
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.989
LENED_010901
Developmentally regulated GTP-binding protein.
   
 
 0.954
LENED_008604
Elongation factor 3.
   
 
 0.947
LENED_006094
Mrna export factor elf1.
   
 
 0.902
LENED_002619
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
   
   0.880
LENED_007650
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.874
LENED_009092
60S ribosomal protein L5.
   
   0.867
LENED_003385
Ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
   
   0.865
Gb1
Guanine nucleotide binding protein beta subunit.
   
   0.862
LENED_003737
Ribosome associated chaperone.
   
   0.859
Your Current Organism:
Lentinula edodes
NCBI taxonomy Id: 5353
Other names: L. edodes, Lentinus edodes, shiitake mushroom
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.