STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGYG_01664Methionine aminopeptidase 2-1; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. (467 aa)    
Predicted Functional Partners:
MGYG_08156
60S ribosomal protein L7.
  
 
 0.937
MGYG_03555
60S ribosomal protein L5.
  
 
 0.936
MGYG_03400
60S ribosomal protein.
  
 
 0.935
MGYG_00123
60S ribosomal protein.
  
   0.925
MGYG_04124
60S ribosomal protein L23a.
  
 
 0.911
MGYG_01064
30S ribosomal protein S14p/S29e; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.901
MGYG_05058
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.845
MGYG_00773
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
  
   0.841
MGYG_07452
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.826
MGYG_07864
54S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
  
 
 0.824
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.