STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5C3NCH3Vacuolar protein sorting-associated protein 60. (213 aa)    
Predicted Functional Partners:
A0A5C3NHE4
DUF605-domain-containing protein.
   
 0.998
A0A5C3NDU9
Vacuolar assembly protein DID2.
   
 0.983
A0A5C3NG54
Snf7-domain-containing protein.
   
 0.983
A0A5C3ND92
Snf7-domain-containing protein.
   
 0.982
A0A5C3NIF1
AAA-domain-containing protein; Belongs to the AAA ATPase family.
   
 0.969
A0A5C3NIL7
Vacuolar sorting protein VPS24.
   
 0.961
A0A5C3NGF3
DUF292-domain-containing protein.
    
 
 0.943
A0A5C3NKQ7
Uncharacterized protein.
   
 0.891
A0A5C3N6C5
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
 
      0.881
A0A5C3ND36
Uncharacterized protein.
    
 0.850
Your Current Organism:
Heliocybe sulcata
NCBI taxonomy Id: 5364
Other names: H. sulcata, Lentinus sulcatus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.