STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT57585.1Putative amino acid-binding periplasmic ABC transporter protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family. (274 aa)    
Predicted Functional Partners:
ACT57586.1
COG0765 ABC-type amino acid transport system, permease component.
 0.998
ACT56646.1
ABC transporter related protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.808
ACT56923.1
Two-component sensor histidine kinase/response regulator hybrid protein; COG0642 Signal transduction histidine kinase.
  
 
 0.639
ACT56941.1
Sensory box/GGDEF family protein; COG2202 FOG: PAS/PAC domain.
     
 0.605
aapM
COG0765 ABC-type amino acid transport system, permease component.
 
 0.560
ACT57587.1
COG3306 Glycosyltransferase involved in LPS biosynthesis.
       0.449
ACT57584.1
Geranyltranstransferase protein; COG0142 Geranylgeranyl pyrophosphate synthase.
       0.405
Your Current Organism:
Liberibacter asiaticus
NCBI taxonomy Id: 537021
Other names: C. Liberibacter asiaticus str. psy62, Candidatus Liberibacter asiaticus psy62, Candidatus Liberibacter asiaticus str. psy62, Candidatus Liberibacter asiaticus strain psy62
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