STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD45371.1Cytochrome c7. (428 aa)    
Predicted Functional Partners:
SFF12844.1
Cytochrome c554 and c-prime.
 
 0.987
SFD83572.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
 
 
 0.963
SFD74577.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
 
 
 0.962
SFE73849.1
Doubled CXXCH domain-containing protein.
  
 0.918
SFD45356.1
Hypothetical protein.
       0.798
SFD74588.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
 
  
 0.746
SFD74525.1
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
  
  
 0.733
SFE12485.1
Tetratricopeptide repeat-containing protein.
 
   
 0.721
SFD83610.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
  
 0.718
SFD83434.1
Myxococcales GC_trans_RRR domain-containing protein/MYXO-CTERM domain-containing protein.
  
     0.682
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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