STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD46238.1Hypothetical protein. (659 aa)    
Predicted Functional Partners:
SFE02290.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.643
SFF38028.1
Hypothetical protein.
  
     0.592
SFE02276.1
Protein of unknown function.
  
     0.581
SFD46255.1
6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.
       0.572
SFF22066.1
Histidine phosphatase superfamily (branch 1).
  
     0.440
SFE93485.1
Dual-action HEIGH metallo-peptidase.
  
     0.438
SFE55787.1
Zn-dependent amino-or carboxypeptidase, M28 family.
  
     0.413
SFD83867.1
Carboxypeptidase regulatory-like domain-containing protein.
  
     0.401
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.