STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD47751.1Uncharacterized conserved protein, UPF0276 family. (647 aa)    
Predicted Functional Partners:
SFD55083.1
Uncharacterized conserved protein, UPF0276 family.
 
  
 0.910
SFF21232.1
Putative oxidoreductase.
  
  
 0.826
SFF29422.1
Hypothetical protein.
  
  
 0.826
SFF36497.1
Hypothetical protein.
   
    0.788
SFF06621.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
    0.763
SFE81470.1
Type III secretion protein V.
   
    0.742
SFE15792.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
   
    0.716
msrA-2
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.695
msrB
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
  
  
 0.695
SFE19758.1
Hypothetical protein.
 
  
0.676
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.