STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD50964.1Tetrapyrrole methylase family protein / MazG family protein. (307 aa)    
Predicted Functional Partners:
SFE48018.1
NAD(P) transhydrogenase.
 
  
 0.861
SFE77128.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
  0.843
cmk
Cytidylate kinase.
 
  
  0.842
SFD77083.1
Hypothetical protein.
    
 0.837
SFF31518.1
HAMP domain-containing protein.
    
 0.837
SFF46358.1
Signal transduction histidine kinase.
    
 0.837
SFE53334.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
     
 0.831
SFF00728.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
  
  0.830
SFD93617.1
Signal transduction histidine kinase.
  
 
  0.829
SFE43613.1
PAS domain S-box-containing protein.
    
  0.829
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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