STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD55722.1Forkhead associated (FHA) domain, binds pSer, pThr, pTyr. (348 aa)    
Predicted Functional Partners:
SFE12485.1
Tetratricopeptide repeat-containing protein.
 
  0.822
SFE43613.1
PAS domain S-box-containing protein.
  
 
  0.802
SFE73719.1
Signal transduction histidine kinase.
  
 
  0.795
SFF00881.1
Signal transduction histidine kinase.
  
 
  0.795
SFF27787.1
Signal transduction histidine kinase.
  
 
  0.795
SFE30080.1
Tetratricopeptide repeat-containing protein.
 
  0.794
SFE47018.1
PAS domain S-box-containing protein.
  
 
  0.793
SFD70268.1
Hypothetical protein.
  
    0.779
SFF12242.1
Tetratricopeptide repeat-containing protein.
 
     0.776
SFD52132.1
Hypothetical protein.
  
    0.773
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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