STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD64344.1Cholesterol oxidase. (525 aa)    
Predicted Functional Partners:
SFF12789.1
4-aminobutyrate aminotransferase.
  
 
 0.820
SFE86655.1
Hypothetical protein.
    
 0.794
SFE40264.1
2-oxoisovalerate dehydrogenase E1 component.
    
  0.782
SFD94771.1
NAD(P)H-flavin reductase.
    
 0.744
SFF14161.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
 0.719
SFD86502.1
Alkaline phosphatase D.
 
      0.653
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
    
 0.652
SFE06124.1
Polyvinyl alcohol dehydrogenase (cytochrome).
     
 0.651
SFD66814.1
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.645
glk
Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.611
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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