STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD65102.1benzoyl-CoA oxygenase, component B. (331 aa)    
Predicted Functional Partners:
SFD65129.1
2,3-dihydro-2,3-dihydroxybenzoyl-CoA ring cleavage enzyme.
 
 
 0.971
SFD65110.1
benzoyl-CoA 2,3-dioxygenase component B.
     0.958
SFD94771.1
NAD(P)H-flavin reductase.
  
 0.891
SFE86655.1
Hypothetical protein.
  
 0.891
SFF18093.1
benzoate-CoA ligase.
  
  
  0.804
SFE59525.1
Protein of unknown function.
 
     0.784
SFF05843.1
trans-feruloyl-CoA synthase.
  
  
  0.781
SFD77352.1
AMP-binding enzyme C-terminal domain-containing protein.
  
  
  0.760
SFE09624.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
     0.748
SFE94365.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
  
 
 0.657
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.