STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD66531.1Transporter, CPA2 family. (758 aa)    
Predicted Functional Partners:
SFF14570.1
Chloride channel protein, CIC family.
 
  
 0.630
SFF06621.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
 
 0.578
hpf
SSU ribosomal protein S30P /sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
  
 0.572
SFF06911.1
Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
  
0.560
SFD82668.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.548
SFF31518.1
HAMP domain-containing protein.
 
   
 0.516
SFF42039.1
Monovalent cation:H+ antiporter-2, CPA2 family.
 
  
0.502
SFF46434.1
Monovalent cation:H+ antiporter-2, CPA2 family.
 
  
0.502
SFF07069.1
Monovalent cation:H+ antiporter-2, CPA2 family.
 
  
0.501
SFE28167.1
Transporter, CPA2 family.
 
  
0.500
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.