STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD67339.1HDIG domain-containing protein. (372 aa)    
Predicted Functional Partners:
SFD67353.1
RNA ligase.
 
     0.932
SFD64669.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.862
SFD77792.1
Signal transduction histidine kinase.
    
 0.852
SFD67976.1
PAS domain S-box-containing protein.
  
 
 0.836
SFE52557.1
Protein kinase domain-containing protein.
    
 0.836
SFE73719.1
Signal transduction histidine kinase.
    
 0.826
SFF00881.1
Signal transduction histidine kinase.
    
 0.826
SFF27787.1
Signal transduction histidine kinase.
    
 0.826
SFE59618.1
PAS domain S-box-containing protein.
    
 0.818
SFE93849.1
Predicted ATPase.
    
 0.815
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.