STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD70268.1Hypothetical protein. (1293 aa)    
Predicted Functional Partners:
SFD70288.1
Tetratricopeptide repeat-containing protein.
 
     0.812
SFE12485.1
Tetratricopeptide repeat-containing protein.
 
     0.793
SFD59901.1
TonB family C-terminal domain-containing protein.
  
    0.786
SFD91695.1
WD40-like Beta Propeller Repeat.
 
  
 0.786
SFE12440.1
TonB family C-terminal domain-containing protein.
  
    0.786
SFD55722.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
  
    0.779
SFD55701.1
Forkhead associated (FHA) domain, binds pSer, pThr, pTyr.
  
    0.777
SFD78557.1
TonB family C-terminal domain-containing protein.
  
    0.776
SFF12242.1
Tetratricopeptide repeat-containing protein.
  
     0.775
SFD55311.1
MJ0042 family finger-like domain-containing protein.
  
     0.774
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.