STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD73474.1Capsular exopolysaccharide family. (746 aa)    
Predicted Functional Partners:
SFE98173.1
Polysaccharide export outer membrane protein.
 
 0.999
SFE40938.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.990
SFE41228.1
Hypothetical protein.
  
 
 0.965
SFD66745.1
UDP-N-Acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
 0.895
SFE62071.1
Serine O-acetyltransferase.
  
 
 0.895
SFD66732.1
UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.874
SFD75633.1
Formate dehydrogenase.
    
 0.870
SFF12789.1
4-aminobutyrate aminotransferase.
    
 0.847
SFE94365.1
Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family.
    
  0.830
SFE78669.1
4Fe-4S binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
    
 0.826
Your Current Organism:
Nannocystis exedens
NCBI taxonomy Id: 54
Other names: ATCC 25963, DSM 71, N. exedens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.